Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Gm45167-201ENSMUST00000208007 322 ntBASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Gm10175-201ENSMUST00000086013 645 ntBASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Pcdh17E9PXF0 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gm24513-201ENSMUST00000174964 138 ntBASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gm27397-201ENSMUST00000184997 107 ntBASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 AC115863.1-201ENSMUST00000214815 1813 ntBASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Pcdh17E9PXF0 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Mir3113-201ENSMUST00000175478 76 ntBASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm4899-201ENSMUST00000178708 719 ntBASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Mir8117-201ENSMUST00000184773 107 ntBASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm19164-201ENSMUST00000210667 640 ntBASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Pcdh17E9PXF0 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Pcdh17E9PXF0 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms