Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Gm22918-201ENSMUST00000103855 110 ntBASIC13.83□□□□□ -0.19
Shank1D3YZU1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Gm19164-201ENSMUST00000210667 640 ntBASIC13.83□□□□□ -0.19
Shank1D3YZU1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Shank1D3YZU1 Gm6598-201ENSMUST00000202719 2615 ntBASIC13.83□□□□□ -0.2
Shank1D3YZU1 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.83□□□□□ -0.2
Shank1D3YZU1 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Shank1D3YZU1 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13.83□□□□□ -0.2
Shank1D3YZU1 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.82□□□□□ -0.2
Shank1D3YZU1 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.82□□□□□ -0.2
Shank1D3YZU1 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Gm7653-201ENSMUST00000214567 508 ntBASIC13.82□□□□□ -0.2
Shank1D3YZU1 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.82□□□□□ -0.2
Shank1D3YZU1 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Shank1D3YZU1 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Shank1D3YZU1 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.81□□□□□ -0.2
Shank1D3YZU1 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Shank1D3YZU1 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms