Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 AC162801.1-201ENSMUST00000220612 198 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm37917-201ENSMUST00000194711 392 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.56□□□□□ -0.56
Col6a5A6H584 Gm5356-201ENSMUST00000093326 615 ntBASIC11.56□□□□□ -0.56
Col6a5A6H584 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a5A6H584 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a5A6H584 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.55□□□□□ -0.56
Col6a5A6H584 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a5A6H584 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a5A6H584 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Col6a5A6H584 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC11.55□□□□□ -0.56
Col6a5A6H584 Mir6392-201ENSMUST00000184924 108 ntBASIC11.55□□□□□ -0.56
Col6a5A6H584 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC11.55□□□□□ -0.56
Col6a5A6H584 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.55□□□□□ -0.56
Col6a5A6H584 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Col6a5A6H584 Gm37519-201ENSMUST00000191687 2210 ntBASIC11.55□□□□□ -0.56
Col6a5A6H584 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Trav4d-2-201ENSMUST00000120914 335 ntBASIC11.54□□□□□ -0.56
Col6a5A6H584 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.54□□□□□ -0.56
Col6a5A6H584 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Col6a5A6H584 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Gm7669-201ENSMUST00000210184 1603 ntBASIC11.54□□□□□ -0.56
Col6a5A6H584 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Col6a5A6H584 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Col6a5A6H584 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms