Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm45203-201ENSMUST00000206384 1831 ntBASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm13186-201ENSMUST00000118031 316 ntBASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav3n-3A0A0G2JEM0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms