Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm38042-201ENSMUST00000191614 5208 ntBASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC10.41□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm7507-201ENSMUST00000183053 1008 ntBASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Mir6982-201ENSMUST00000184354 68 ntBASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Ighv1-56A0A0A6YXG2 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ighv1-56A0A0A6YXG2 Gm7669-201ENSMUST00000210184 1603 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms