Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Trav6d-5A0A075B6B9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm45605-201ENSMUST00000210265 4269 ntBASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav6d-5A0A075B6B9 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav6d-5A0A075B6B9 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm38058-201ENSMUST00000194323 4368 ntBASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms