Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav16A0A075B653 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.98□□□□□ -0.49
Trav16A0A075B653 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm6858-201ENSMUST00000208582 1468 ntBASIC11.98□□□□□ -0.49
Trav16A0A075B653 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm715-201ENSMUST00000117865 831 ntBASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm13474-201ENSMUST00000122466 815 ntBASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gm7370-201ENSMUST00000219471 767 ntBASIC11.98□□□□□ -0.49
Trav16A0A075B653 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav16A0A075B653 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Spsb2-203ENSMUST00000112473 1322 ntBASIC11.97□□□□□ -0.49
Trav16A0A075B653 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 AC132265.1-201ENSMUST00000219233 1665 ntBASIC11.97□□□□□ -0.49
Trav16A0A075B653 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav16A0A075B653 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Gm21814-202ENSMUST00000203277 873 ntBASIC11.96□□□□□ -0.49
Trav16A0A075B653 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav16A0A075B653 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav16A0A075B653 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav16A0A075B653 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 159 ms