Protein–RNA interactions for Protein: A0A075B634

Trav16n, T cell receptor alpha variable 16n, mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16nA0A075B634 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Gm16425-201ENSMUST00000118143 3130 ntBASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Trav16nA0A075B634 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Gm6257-201ENSMUST00000163864 910 ntBASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Mir5122-201ENSMUST00000175004 89 ntBASIC11.71□□□□□ -0.53
Trav16nA0A075B634 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Trav16nA0A075B634 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Trav16nA0A075B634 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm26039-201ENSMUST00000158152 144 ntBASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm9889-202ENSMUST00000206983 1577 ntBASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Trav16nA0A075B634 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms