Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm18101-201ENSMUST00000215769 548 ntBASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm22697-201ENSMUST00000175194 63 ntBASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm9987-201ENSMUST00000069768 567 ntBASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 AC127302.2-201ENSMUST00000215212 268 ntBASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav15d-1-dv6d-1A0A075B624 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Zkscan4-202ENSMUST00000225845 1506 ntBASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav15d-1-dv6d-1A0A075B624 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms