Protein–RNA interactions for Protein: S4R2K0

Pdf, Peptide deformylase, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdfS4R2K0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Gfra2-202ENSMUST00000227633 1480 ntBASIC11.91□□□□□ -0.5
PdfS4R2K0 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Gm10013-201ENSMUST00000106074 672 ntBASIC11.91□□□□□ -0.5
PdfS4R2K0 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.91□□□□□ -0.5
PdfS4R2K0 AC134329.2-201ENSMUST00000217897 428 ntBASIC11.91□□□□□ -0.5
PdfS4R2K0 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
PdfS4R2K0 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
PdfS4R2K0 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Mir5130-201ENSMUST00000175160 84 ntBASIC11.9□□□□□ -0.5
PdfS4R2K0 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
PdfS4R2K0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
PdfS4R2K0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
PdfS4R2K0 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
PdfS4R2K0 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
PdfS4R2K0 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
PdfS4R2K0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.9□□□□□ -0.51
PdfS4R2K0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PdfS4R2K0 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
PdfS4R2K0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC11.89□□□□□ -0.51
PdfS4R2K0 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
PdfS4R2K0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
PdfS4R2K0 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms