Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Upk1bQ9Z2C6 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Upk1bQ9Z2C6 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Gm37722-201ENSMUST00000193757 208 ntBASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Upk1bQ9Z2C6 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Gm13436-201ENSMUST00000120418 567 ntBASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 AC114585.2-202ENSMUST00000228094 426 ntBASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Upk1bQ9Z2C6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Gm5049-201ENSMUST00000195878 1590 ntBASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Upk1bQ9Z2C6 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms