Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pfdn5Q9WU28 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 AC154855.1-201ENSMUST00000227353 1458 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm42473-201ENSMUST00000201056 2291 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm5643-201ENSMUST00000117081 966 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm37856-201ENSMUST00000191634 999 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pfdn5Q9WU28 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Gm7791-201ENSMUST00000219066 539 ntBASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pfdn5Q9WU28 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Gm11960-202ENSMUST00000181063 2858 ntBASIC12.71□□□□□ -0.38
Pfdn5Q9WU28 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 Timm23-208ENSMUST00000226683 750 ntBASIC12.7□□□□□ -0.38
Pfdn5Q9WU28 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms