Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.11■□□□□ 0.01
Cdh17Q9R100 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Gm15165-201ENSMUST00000118140 502 ntBASIC15.11■□□□□ 0.01
Cdh17Q9R100 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Mir7071-201ENSMUST00000184847 69 ntBASIC15.11■□□□□ 0.01
Cdh17Q9R100 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 AC160980.1-201ENSMUST00000224136 970 ntBASIC15.11■□□□□ 0.01
Cdh17Q9R100 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Cdh17Q9R100 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.1■□□□□ 0.01
Cdh17Q9R100 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.1■□□□□ 0.01
Cdh17Q9R100 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC15.1■□□□□ 0.01
Cdh17Q9R100 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Cdh17Q9R100 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm13836-201ENSMUST00000121159 501 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm25745-201ENSMUST00000174945 133 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm19164-201ENSMUST00000210667 640 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 AC159093.1-201ENSMUST00000227779 380 ntBASIC15.09■□□□□ 0.01
Cdh17Q9R100 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Cdh17Q9R100 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh17Q9R100 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh17Q9R100 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh17Q9R100 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
Cdh17Q9R100 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh17Q9R100 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Cdh17Q9R100 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh17Q9R100 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Cdh17Q9R100 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms