Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Rbfox1Q9JJ43 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rbfox1Q9JJ43 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rbfox1Q9JJ43 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Gm10252-201ENSMUST00000209541 832 ntBASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rbfox1Q9JJ43 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Rbfox1Q9JJ43 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Rbfox1Q9JJ43 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms