Protein–RNA interactions for Protein: Q9D7D1

Rnf225, RING finger protein 225, mousemouse

Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf225Q9D7D1 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf225Q9D7D1 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf225Q9D7D1 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rnf225Q9D7D1 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf225Q9D7D1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf225Q9D7D1 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Gm42516-201ENSMUST00000198691 767 ntBASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf225Q9D7D1 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 AC153801.1-201ENSMUST00000217904 947 ntBASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 AC153512.2-201ENSMUST00000220363 1273 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf225Q9D7D1 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm24590-201ENSMUST00000116699 119 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm9103-201ENSMUST00000119371 405 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm11780-201ENSMUST00000136880 516 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf225Q9D7D1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms