Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cldnd1Q9CQX5 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Gm7653-201ENSMUST00000214567 508 ntBASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Gm45606-201ENSMUST00000209836 2795 ntBASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cldnd1Q9CQX5 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 AC135669.1-201ENSMUST00000213585 412 ntBASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC15.79■□□□□ 0.12
Cldnd1Q9CQX5 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Gm7488-201ENSMUST00000117148 684 ntBASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cldnd1Q9CQX5 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cldnd1Q9CQX5 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cldnd1Q9CQX5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms