Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.64■□□□□ 0.09
Lsm7Q9CQQ8 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsm7Q9CQQ8 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsm7Q9CQQ8 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Lsm7Q9CQQ8 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Lsm7Q9CQQ8 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Gm14722-201ENSMUST00000118943 689 ntBASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Mir8117-201ENSMUST00000184773 107 ntBASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm7Q9CQQ8 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Gm11453-201ENSMUST00000117318 1007 ntBASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Gm27300-201ENSMUST00000184085 97 ntBASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Gm27335-201ENSMUST00000184758 97 ntBASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm7Q9CQQ8 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Mir3113-201ENSMUST00000175478 76 ntBASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm7Q9CQQ8 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms