Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.01□□□□□ -0.17
Krt88Q9CPR6 Gm9889-202ENSMUST00000206983 1577 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Krt88Q9CPR6 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt88Q9CPR6 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Krt88Q9CPR6 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Krt88Q9CPR6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC14□□□□□ -0.17
Krt88Q9CPR6 Gm26039-201ENSMUST00000158152 144 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Mir5122-201ENSMUST00000175004 89 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14□□□□□ -0.17
Krt88Q9CPR6 Mir7071-201ENSMUST00000184847 69 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 AL672049.1-201ENSMUST00000197943 91 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Krt88Q9CPR6 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Krt88Q9CPR6 Gm9768-201ENSMUST00000206007 2861 ntBASIC14□□□□□ -0.17
Krt88Q9CPR6 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Gm10052-201ENSMUST00000168019 960 ntBASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Gm7729-201ENSMUST00000050143 801 ntBASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Ecel1-203ENSMUST00000160810 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Krt88Q9CPR6 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm8784-201ENSMUST00000222096 1435 ntBASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Wnt10b-206ENSMUST00000228546 2709 ntBASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Gm44430-201ENSMUST00000203376 995 ntBASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Krt88Q9CPR6 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms