Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trim11Q99PQ2 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Gm4459-201ENSMUST00000118750 468 ntBASIC17.66■□□□□ 0.42
Trim11Q99PQ2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Gm18622-201ENSMUST00000219361 595 ntBASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trim11Q99PQ2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 BC037039-201ENSMUST00000192003 2205 ntBASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trim11Q99PQ2 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Gm44443-201ENSMUST00000204396 5633 ntBASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim11Q99PQ2 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm14722-201ENSMUST00000118943 689 ntBASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm8344-201ENSMUST00000119813 856 ntBASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm12895-201ENSMUST00000122214 226 ntBASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm7506-201ENSMUST00000207758 815 ntBASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim11Q99PQ2 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim11Q99PQ2 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim11Q99PQ2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim11Q99PQ2 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms