Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Rnf111Q99ML9 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Rnf111Q99ML9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Wnt10b-206ENSMUST00000228546 2709 ntBASIC15.04■□□□□ -0
Rnf111Q99ML9 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rnf111Q99ML9 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Rnf111Q99ML9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Rnf111Q99ML9 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Rnf111Q99ML9 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC15.03■□□□□ -0
Rnf111Q99ML9 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.03■□□□□ -0
Rnf111Q99ML9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Gm7367-201ENSMUST00000057611 492 ntBASIC15.03■□□□□ -0
Rnf111Q99ML9 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Rnf111Q99ML9 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Rnf111Q99ML9 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rnf111Q99ML9 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rnf111Q99ML9 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.02■□□□□ -0
Rnf111Q99ML9 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Efs-202ENSMUST00000227037 2540 ntBASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rnf111Q99ML9 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC15.01□□□□□ -0.01
Rnf111Q99ML9 Gm13312-201ENSMUST00000119631 718 ntBASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms