Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Nkd1Q99MH6 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Nkd1Q99MH6 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nkd1Q99MH6 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Gm11950-201ENSMUST00000121615 838 ntBASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Gm7507-201ENSMUST00000183053 1008 ntBASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nkd1Q99MH6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Gm6345-202ENSMUST00000180900 204 ntBASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Gm10231-201ENSMUST00000181584 441 ntBASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nkd1Q99MH6 Gm10175-202ENSMUST00000208752 441 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 51.6 ms