Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.61■□□□□ 0.25
Tlr3Q99MB1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Gm10355-201ENSMUST00000097146 517 ntBASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Tlr3Q99MB1 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm15358-201ENSMUST00000119249 520 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm7862-201ENSMUST00000121461 292 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm27525-201ENSMUST00000184465 107 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44357-201ENSMUST00000195897 142 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm19658-201ENSMUST00000196231 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44367-201ENSMUST00000196836 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44350-201ENSMUST00000197197 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44390-201ENSMUST00000197533 144 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44313-201ENSMUST00000198018 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44486-201ENSMUST00000198508 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44314-201ENSMUST00000199263 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44394-201ENSMUST00000199558 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44484-201ENSMUST00000199873 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44466-201ENSMUST00000200264 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm44359-201ENSMUST00000200671 138 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 AC158538.2-201ENSMUST00000225455 906 ntBASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Tlr3Q99MB1 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Gm11780-201ENSMUST00000136880 516 ntBASIC16.59■□□□□ 0.25
Tlr3Q99MB1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 AC159093.1-201ENSMUST00000227779 380 ntBASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Tlr3Q99MB1 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Tlr3Q99MB1 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Mir5131-201ENSMUST00000175426 93 ntBASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Gm6296-201ENSMUST00000222599 943 ntBASIC16.58■□□□□ 0.24
Tlr3Q99MB1 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Tlr3Q99MB1 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms