Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Clcc1Q99LI2 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 AC122024.2-201ENSMUST00000220086 871 ntBASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 AC131709.1-201ENSMUST00000224731 1180 ntBASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Clcc1Q99LI2 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm11873-201ENSMUST00000117877 1304 ntBASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm27397-201ENSMUST00000184997 107 ntBASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gm19164-201ENSMUST00000210667 640 ntBASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Bloc1s5-203ENSMUST00000224902 612 ntBASIC15.28■□□□□ 0.04
Clcc1Q99LI2 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Clcc1Q99LI2 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Gm24513-201ENSMUST00000174964 138 ntBASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Gm27300-201ENSMUST00000184085 97 ntBASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Gm27335-201ENSMUST00000184758 97 ntBASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Gm45683-201ENSMUST00000210825 1247 ntBASIC15.27■□□□□ 0.04
Clcc1Q99LI2 AC174742.1-201ENSMUST00000218272 304 ntBASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Clcc1Q99LI2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Clcc1Q99LI2 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Clcc1Q99LI2 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Clcc1Q99LI2 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Clcc1Q99LI2 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Clcc1Q99LI2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms