Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC18.25■□□□□ 0.51
Col20a1Q923P0 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Col20a1Q923P0 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Gm15427-201ENSMUST00000117288 531 ntBASIC18.24■□□□□ 0.51
Col20a1Q923P0 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC18.24■□□□□ 0.51
Col20a1Q923P0 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC18.24■□□□□ 0.51
Col20a1Q923P0 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Col20a1Q923P0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Gm26308-201ENSMUST00000157768 69 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Chchd1-203ENSMUST00000224633 557 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Gm12892-201ENSMUST00000117367 1146 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Gm7556-201ENSMUST00000201178 1084 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 AC124549.3-201ENSMUST00000225541 367 ntBASIC18.23■□□□□ 0.51
Col20a1Q923P0 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.23■□□□□ 0.51
Col20a1Q923P0 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Col20a1Q923P0 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Gm19430-201ENSMUST00000193847 2137 ntBASIC18.22■□□□□ 0.51
Col20a1Q923P0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Col20a1Q923P0 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Col20a1Q923P0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Col20a1Q923P0 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms