Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Mir5122-201ENSMUST00000175004 89 ntBASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Gm29994-201ENSMUST00000195495 1193 ntBASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Chmp1aQ921W0 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Chmp1aQ921W0 Gm45546-201ENSMUST00000211053 2394 ntBASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Gm10676-201ENSMUST00000098778 3221 ntBASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp1aQ921W0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms