Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gm37584-201ENSMUST00000193595 1290 ntBASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Birc2-201ENSMUST00000054878 378 ntBASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pcdhb1Q91Y08 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Gm34391-201ENSMUST00000203706 907 ntBASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pcdhb1Q91Y08 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb1Q91Y08 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb1Q91Y08 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb1Q91Y08 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pcdhb1Q91Y08 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Gm11780-201ENSMUST00000136880 516 ntBASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Gm4535-201ENSMUST00000182274 558 ntBASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Gm10355-201ENSMUST00000097146 517 ntBASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Grk6-207ENSMUST00000225925 2769 ntBASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pcdhb1Q91Y08 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.07■□□□□ 0.16
Pcdhb1Q91Y08 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms