Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm25016-201ENSMUST00000158399 131 ntBASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm33142-201ENSMUST00000193913 867 ntBASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm7213-201ENSMUST00000215977 950 ntBASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhb3Q91XZ7 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm21559-201ENSMUST00000220638 855 ntBASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm8587-201ENSMUST00000076538 843 ntBASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhb3Q91XZ7 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Gm20614-201ENSMUST00000177106 632 ntBASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Pcdhb3Q91XZ7 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Pcdhb3Q91XZ7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Pcdhb3Q91XZ7 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms