Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 AC130669.1-201ENSMUST00000228537 1672 ntBASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Mir6990-201ENSMUST00000183724 91 ntBASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 AC159114.1-201ENSMUST00000220349 266 ntBASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdhb5Q91XZ5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Gm18889-201ENSMUST00000174284 929 ntBASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 AC158982.1-201ENSMUST00000228377 901 ntBASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 Gm19439-201ENSMUST00000198195 2273 ntBASIC18.18■□□□□ 0.5
Pcdhb5Q91XZ5 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Ntrk2-205ENSMUST00000224402 2284 ntBASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 AC126250.1-201ENSMUST00000228343 1768 ntBASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdhb5Q91XZ5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Gm43474-201ENSMUST00000196415 774 ntBASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdhb5Q91XZ5 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb5Q91XZ5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb5Q91XZ5 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Pcdhb5Q91XZ5 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb5Q91XZ5 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb5Q91XZ5 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms