Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Pcdhga3Q91XY5 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Pcdhga3Q91XY5 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pcdhga3Q91XY5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pcdhga3Q91XY5 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Gm17807-201ENSMUST00000186869 298 ntBASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Gm7367-201ENSMUST00000057611 492 ntBASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pcdhga3Q91XY5 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms