Protein–RNA interactions for Protein: Q91XX9

Pcdhga9, Protocadherin gamma A9, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga9Q91XX9 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gm25990-201ENSMUST00000102440 86 ntBASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gm13418-201ENSMUST00000119097 944 ntBASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Pcdhga9Q91XX9 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gm13337-201ENSMUST00000119183 1594 ntBASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gm11780-201ENSMUST00000136880 516 ntBASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Mir5126-201ENSMUST00000175513 77 ntBASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 AC132104.2-201ENSMUST00000215011 266 ntBASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 AC154757.1-201ENSMUST00000228289 336 ntBASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdhga9Q91XX9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Gm15358-201ENSMUST00000119249 520 ntBASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Gm7230-201ENSMUST00000173026 815 ntBASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdhga9Q91XX9 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms