Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cspg4Q8VHY0 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Gm10154-201ENSMUST00000084445 354 ntBASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.27□□□□□ -0.28
Cspg4Q8VHY0 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Gm29541-201ENSMUST00000191351 678 ntBASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cspg4Q8VHY0 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm15824-201ENSMUST00000119516 955 ntBASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm6180-201ENSMUST00000065243 498 ntBASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cspg4Q8VHY0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Gm24158-201ENSMUST00000175263 71 ntBASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cspg4Q8VHY0 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms