Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Vps39Q8R5L3 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Gm27704-201ENSMUST00000185094 107 ntBASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Gm7367-201ENSMUST00000057611 492 ntBASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Vps39Q8R5L3 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Gm8784-201ENSMUST00000222096 1435 ntBASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Vps39Q8R5L3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Vps39Q8R5L3 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Gm15165-201ENSMUST00000118140 502 ntBASIC15.51■□□□□ 0.07
Vps39Q8R5L3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Vps39Q8R5L3 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms