Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Rpp40Q8R1F9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Snx14-206ENSMUST00000173039 2970 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Gm11453-201ENSMUST00000117318 1007 ntBASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rpp40Q8R1F9 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Gm5712-201ENSMUST00000199748 1043 ntBASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Gm5184-201ENSMUST00000220417 1702 ntBASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rpp40Q8R1F9 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm11779-201ENSMUST00000118541 368 ntBASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm9727-201ENSMUST00000161387 555 ntBASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rpp40Q8R1F9 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms