Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Rtn4rl1Q8K0S5 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4rl1Q8K0S5 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4rl1Q8K0S5 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4rl1Q8K0S5 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Rtn4rl1Q8K0S5 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm16026-204ENSMUST00000162652 683 ntBASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rtn4rl1Q8K0S5 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm38294-201ENSMUST00000192831 381 ntBASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rtn4rl1Q8K0S5 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm2810-201ENSMUST00000118681 990 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm12151-201ENSMUST00000121374 290 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm27306-201ENSMUST00000183970 107 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Mir6977-201ENSMUST00000184960 64 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rtn4rl1Q8K0S5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Gm6415-201ENSMUST00000118488 348 ntBASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.55■□□□□ 0.08
Rtn4rl1Q8K0S5 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms