Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm18755-201ENSMUST00000218030 1099 ntBASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Hist3h2bbQ8CGP0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Hist3h2bbQ8CGP0 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Hist3h2bbQ8CGP0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm22238-201ENSMUST00000175222 88 ntBASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.76□□□□□ -0.53
Hist3h2bbQ8CGP0 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Hist3h2bbQ8CGP0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms