Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.82□□□□□ -0.2
ShfQ8CG80 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Gm7556-201ENSMUST00000201178 1084 ntBASIC13.82□□□□□ -0.2
ShfQ8CG80 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.82□□□□□ -0.2
ShfQ8CG80 Gm19164-201ENSMUST00000210667 640 ntBASIC13.82□□□□□ -0.2
ShfQ8CG80 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.82□□□□□ -0.2
ShfQ8CG80 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
ShfQ8CG80 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Reep4-201ENSMUST00000047218 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ShfQ8CG80 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC13.81□□□□□ -0.2
ShfQ8CG80 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.81□□□□□ -0.2
ShfQ8CG80 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.81□□□□□ -0.2
ShfQ8CG80 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ShfQ8CG80 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
ShfQ8CG80 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.8□□□□□ -0.2
ShfQ8CG80 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.8□□□□□ -0.2
ShfQ8CG80 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
ShfQ8CG80 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ShfQ8CG80 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms