Protein–RNA interactions for Protein: Q8CD60

UPF0583 protein C15orf59 homolog, mousemouse

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CD60 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8CD60 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Q8CD60 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8CD60 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8CD60 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Q8CD60 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Q8CD60 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Gm37500-201ENSMUST00000192059 1443 ntBASIC16.28■□□□□ 0.2
Q8CD60 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Gm3928-201ENSMUST00000121141 1307 ntBASIC16.28■□□□□ 0.2
Q8CD60 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Q8CD60 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC16.28■□□□□ 0.2
Q8CD60 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.28■□□□□ 0.2
Q8CD60 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.28■□□□□ 0.2
Q8CD60 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Q8CD60 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Q8CD60 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC16.28■□□□□ 0.2
Q8CD60 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Q8CD60 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Q8CD60 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC16.27■□□□□ 0.2
Q8CD60 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Q8CD60 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Q8CD60 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q8CD60 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.27■□□□□ 0.19
Q8CD60 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q8CD60 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC16.27■□□□□ 0.19
Q8CD60 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Q8CD60 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.26■□□□□ 0.19
Q8CD60 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Q8CD60 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.26■□□□□ 0.19
Q8CD60 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Gm7230-201ENSMUST00000173026 815 ntBASIC16.26■□□□□ 0.19
Q8CD60 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.26■□□□□ 0.19
Q8CD60 Gm10060-201ENSMUST00000212002 111 ntBASIC16.26■□□□□ 0.19
Q8CD60 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.26■□□□□ 0.19
Q8CD60 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Q8CD60 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
Q8CD60 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Q8CD60 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Q8CD60 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Q8CD60 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Q8CD60 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Q8CD60 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.25■□□□□ 0.19
Q8CD60 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Q8CD60 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Q8CD60 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.25■□□□□ 0.19
Q8CD60 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms