Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Gm7889-201ENSMUST00000185591 958 ntBASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 AC134329.2-201ENSMUST00000217897 428 ntBASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Gm13337-201ENSMUST00000119183 1594 ntBASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Lysmd4Q8CC84 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Gm27389-201ENSMUST00000183622 195 ntBASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Lysmd4Q8CC84 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Lysmd4Q8CC84 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Lysmd4Q8CC84 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lysmd4Q8CC84 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lysmd4Q8CC84 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms