Protein–RNA interactions for Protein: Q8C7N7

Aph1b, Gamma-secretase subunit APH-1B, mousemouse

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Aph1bQ8C7N7 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Aph1bQ8C7N7 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Aph1bQ8C7N7 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Aph1bQ8C7N7 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
Aph1bQ8C7N7 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Aph1bQ8C7N7 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
Aph1bQ8C7N7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Sybu-209ENSMUST00000228639 4113 ntBASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Gm15165-201ENSMUST00000118140 502 ntBASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Gm25745-201ENSMUST00000174945 133 ntBASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Gm27867-201ENSMUST00000184778 125 ntBASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Aph1bQ8C7N7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Gm18622-201ENSMUST00000219361 595 ntBASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Otx2os1-206ENSMUST00000228153 787 ntBASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Aph1bQ8C7N7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Aph1bQ8C7N7 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.3■□□□□ 0.04
Aph1bQ8C7N7 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Aph1bQ8C7N7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms