Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13□□□□□ -0.33
Tsen54Q8C2A2 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm10231-201ENSMUST00000181584 441 ntBASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm10175-202ENSMUST00000208752 441 ntBASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Tsen54Q8C2A2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Tsen54Q8C2A2 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms