Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cps1Q8C196 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cps1Q8C196 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC20.61■□□□□ 0.89
Cps1Q8C196 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cps1Q8C196 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC20.6■□□□□ 0.89
Cps1Q8C196 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC20.6■□□□□ 0.89
Cps1Q8C196 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC20.6■□□□□ 0.89
Cps1Q8C196 Dupd1-202ENSMUST00000224735 548 ntBASIC20.6■□□□□ 0.89
Cps1Q8C196 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cps1Q8C196 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC20.59■□□□□ 0.89
Cps1Q8C196 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Gm9794-201ENSMUST00000202370 423 ntBASIC20.59■□□□□ 0.89
Cps1Q8C196 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Cps1Q8C196 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cps1Q8C196 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Gm5566-201ENSMUST00000116118 459 ntBASIC20.58■□□□□ 0.89
Cps1Q8C196 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC20.58■□□□□ 0.89
Cps1Q8C196 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC20.58■□□□□ 0.89
Cps1Q8C196 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Cps1Q8C196 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cps1Q8C196 Gm6263-201ENSMUST00000120029 1342 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cps1Q8C196 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cps1Q8C196 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm4875-201ENSMUST00000118257 786 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC20.58■□□□□ 0.88
Cps1Q8C196 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Cps1Q8C196 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm29310-201ENSMUST00000185468 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21825-201ENSMUST00000185728 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm29109-201ENSMUST00000185895 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21896-201ENSMUST00000186520 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21873-201ENSMUST00000186728 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21794-201ENSMUST00000187056 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21880-201ENSMUST00000187275 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21826-201ENSMUST00000187451 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21198-201ENSMUST00000188393 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21749-201ENSMUST00000189343 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21901-201ENSMUST00000189568 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm29424-201ENSMUST00000189716 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm28599-201ENSMUST00000189838 694 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21867-201ENSMUST00000189917 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm29269-201ENSMUST00000190087 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21722-201ENSMUST00000190153 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm28423-201ENSMUST00000190701 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21899-201ENSMUST00000190745 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21910-201ENSMUST00000191163 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21849-201ENSMUST00000191571 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm28678-201ENSMUST00000191593 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm20910-201ENSMUST00000193268 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 Gm21871-201ENSMUST00000194621 696 ntBASIC20.58■□□□□ 0.88
Cps1Q8C196 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC20.58■□□□□ 0.88
Cps1Q8C196 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cps1Q8C196 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cps1Q8C196 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
Cps1Q8C196 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cps1Q8C196 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms