Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Gm8097-201ENSMUST00000117903 829 ntBASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sh3rf3Q8C120 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Sh3rf3Q8C120 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.14■□□□□ 0.18
Sh3rf3Q8C120 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Sh3rf3Q8C120 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44357-201ENSMUST00000195897 142 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm19658-201ENSMUST00000196231 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44367-201ENSMUST00000196836 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44350-201ENSMUST00000197197 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44390-201ENSMUST00000197533 144 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44313-201ENSMUST00000198018 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44486-201ENSMUST00000198508 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44314-201ENSMUST00000199263 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44394-201ENSMUST00000199558 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44484-201ENSMUST00000199873 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44466-201ENSMUST00000200264 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm44359-201ENSMUST00000200671 138 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.14■□□□□ 0.17
Sh3rf3Q8C120 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Gm17971-201ENSMUST00000190239 806 ntBASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Sh3rf3Q8C120 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gm24589-201ENSMUST00000116692 94 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Sh3rf3Q8C120 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms