Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Zfp264-201ENSMUST00000208656 1563 ntBASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm14464-201ENSMUST00000119658 1254 ntBASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm4217-201ENSMUST00000182243 1002 ntBASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm36967-201ENSMUST00000193814 266 ntBASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC11.85□□□□□ -0.51
Cphx2Q8BX39 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC11.84□□□□□ -0.51
Cphx2Q8BX39 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.84□□□□□ -0.51
Cphx2Q8BX39 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Cphx2Q8BX39 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.51
Cphx2Q8BX39 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Cphx2Q8BX39 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Gm13559-201ENSMUST00000120476 863 ntBASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Gm43799-201ENSMUST00000201845 579 ntBASIC11.83□□□□□ -0.52
Cphx2Q8BX39 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cphx2Q8BX39 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cphx2Q8BX39 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms