Protein–RNA interactions for Protein: Q8BN21

Vrk2, Serine/threonine-protein kinase VRK2, mousemouse

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk2Q8BN21 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk2Q8BN21 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk2Q8BN21 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Vrk2Q8BN21 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC15.08■□□□□ 0
Vrk2Q8BN21 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Vrk2Q8BN21 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Gm10584-201ENSMUST00000207036 2628 ntBASIC15.07■□□□□ 0
Vrk2Q8BN21 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Vrk2Q8BN21 AC154471.1-201ENSMUST00000224418 436 ntBASIC15.07■□□□□ 0
Vrk2Q8BN21 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Vrk2Q8BN21 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Vrk2Q8BN21 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vrk2Q8BN21 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.06■□□□□ 0
Vrk2Q8BN21 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC15.06■□□□□ 0
Vrk2Q8BN21 Gm15165-201ENSMUST00000118140 502 ntBASIC15.06■□□□□ 0
Vrk2Q8BN21 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC15.06■□□□□ 0
Vrk2Q8BN21 AC117588.1-201ENSMUST00000228510 999 ntBASIC15.06■□□□□ 0
Vrk2Q8BN21 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.06■□□□□ 0
Vrk2Q8BN21 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Vrk2Q8BN21 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Vrk2Q8BN21 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Vrk2Q8BN21 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC15.05■□□□□ -0
Vrk2Q8BN21 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Gm25745-201ENSMUST00000174945 133 ntBASIC15.05■□□□□ -0
Vrk2Q8BN21 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Vrk2Q8BN21 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC15.05■□□□□ -0
Vrk2Q8BN21 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC15.05■□□□□ -0
Vrk2Q8BN21 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Vrk2Q8BN21 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Vrk2Q8BN21 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms