Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Olfr129-201ENSMUST00000122318 993 ntBASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Mir3081-201ENSMUST00000175305 84 ntBASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 AC154471.1-201ENSMUST00000224418 436 ntBASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Ccdc40Q8BI79 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 CT025610.1-201ENSMUST00000224552 1786 ntBASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm6257-201ENSMUST00000163864 910 ntBASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.19■□□□□ 0.18
Ccdc40Q8BI79 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm7284-201ENSMUST00000131667 944 ntBASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Ccdc40Q8BI79 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Ccdc40Q8BI79 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms