Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Gm15794-201ENSMUST00000120182 631 ntBASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Gm29518-201ENSMUST00000190858 372 ntBASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.97□□□□□ -0.01
Rnf38Q8BI21 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rnf38Q8BI21 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Gm11950-201ENSMUST00000121615 838 ntBASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Gm17808-201ENSMUST00000200859 894 ntBASIC14.96□□□□□ -0.01
Rnf38Q8BI21 AC130713.1-201ENSMUST00000228853 1096 ntBASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rnf38Q8BI21 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
Rnf38Q8BI21 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rnf38Q8BI21 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rnf38Q8BI21 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms