Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Gm11025-201ENSMUST00000140773 466 ntBASIC14.78□□□□□ -0.04
Vrk1Q80X41 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Vrk1Q80X41 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Gm5366-201ENSMUST00000215494 1338 ntBASIC14.77□□□□□ -0.04
Vrk1Q80X41 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Vrk1Q80X41 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.77□□□□□ -0.05
Vrk1Q80X41 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.77□□□□□ -0.05
Vrk1Q80X41 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Vrk1Q80X41 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gm13597-201ENSMUST00000121239 375 ntBASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gm10576-201ENSMUST00000191927 825 ntBASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gm17968-201ENSMUST00000194902 784 ntBASIC14.76□□□□□ -0.05
Vrk1Q80X41 AC158538.2-201ENSMUST00000225455 906 ntBASIC14.76□□□□□ -0.05
Vrk1Q80X41 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Vrk1Q80X41 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.75□□□□□ -0.05
Vrk1Q80X41 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.75□□□□□ -0.05
Vrk1Q80X41 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Gm15920-201ENSMUST00000118998 402 ntBASIC14.75□□□□□ -0.05
Vrk1Q80X41 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Vrk1Q80X41 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms