Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3tc2Q80VA5 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3tc2Q80VA5 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.86■□□□□ 0.29
Sh3tc2Q80VA5 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3tc2Q80VA5 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Sh3tc2Q80VA5 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Gm27494-201ENSMUST00000184735 189 ntBASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.85■□□□□ 0.29
Sh3tc2Q80VA5 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Gm13597-201ENSMUST00000121239 375 ntBASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Mir1895-201ENSMUST00000122615 79 ntBASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 AA543401-201ENSMUST00000164248 1269 ntBASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Sh3tc2Q80VA5 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3tc2Q80VA5 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Sh3tc2Q80VA5 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Sh3tc2Q80VA5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Gm8344-201ENSMUST00000119813 856 ntBASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Gm7787-201ENSMUST00000216858 688 ntBASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Sh3tc2Q80VA5 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Sh3tc2Q80VA5 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms