Protein–RNA interactions for Protein: Q80U95

Ube3c, Ubiquitin-protein ligase E3C, mousemouse

Predictions only

Length 1,083 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3cQ80U95 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ube3cQ80U95 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Prob1-201ENSMUST00000097619 3021 ntBASIC18.19■□□□□ 0.5
Ube3cQ80U95 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 AC163637.1-201ENSMUST00000215491 1894 ntBASIC18.19■□□□□ 0.5
Ube3cQ80U95 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC18.19■□□□□ 0.5
Ube3cQ80U95 Ccdc166-201ENSMUST00000182172 2584 ntBASIC18.19■□□□□ 0.5
Ube3cQ80U95 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Gm27494-201ENSMUST00000184735 189 ntBASIC18.18■□□□□ 0.5
Ube3cQ80U95 Gm2272-201ENSMUST00000194903 582 ntBASIC18.18■□□□□ 0.5
Ube3cQ80U95 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.18■□□□□ 0.5
Ube3cQ80U95 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ube3cQ80U95 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 CT009510.1-201ENSMUST00000227972 270 ntBASIC18.17■□□□□ 0.5
Ube3cQ80U95 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ube3cQ80U95 Gm13332-201ENSMUST00000120451 1398 ntBASIC18.17■□□□□ 0.5
Ube3cQ80U95 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Gm13365-201ENSMUST00000121188 973 ntBASIC18.16■□□□□ 0.5
Ube3cQ80U95 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC18.16■□□□□ 0.5
Ube3cQ80U95 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms