Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Prpf38bQ80SY5 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Gm44945-201ENSMUST00000206764 1187 ntBASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Gm8655-201ENSMUST00000221159 852 ntBASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Prpf38bQ80SY5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Prpf38bQ80SY5 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Gm44616-201ENSMUST00000206417 1732 ntBASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 AC114585.2-202ENSMUST00000228094 426 ntBASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Prpf38bQ80SY5 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
Prpf38bQ80SY5 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
Prpf38bQ80SY5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Prpf38bQ80SY5 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Prpf38bQ80SY5 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Wnt10b-206ENSMUST00000228546 2709 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Prpf38bQ80SY5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms